DuplicatedSourceException when I use "mvn -f" and there is symbolics links

Freddy Mallet added a comment - 10/Oct/11 9:22 AM Hi David, I don't understand what you expect from Sonar as there really seems to be a duplication of the source directories ?

David Mata Górriz added a comment - 10/Oct/11 10:36 AM There is no duplication. There is only a link. I don't understand why "/jrepos/develplugin/workspace/src/main/java" is the source directory if didn't say it to maven. If I write "mvn -B -f /cis/jenkins/jobs/develplugin/workspace/pom.xml clean sonar:sonar ...", why is the pointed directory in the source path too? If sonar works fine, then sonar doens't allow links using "ln -s".

Evgeny Mandrikov added a comment - 11/Oct/11 4:32 PM Hi David, To help us understand your issue. Could you please answer on following questions : Your project can be built with Maven ? If so, then could you please execute "mvn help:effective-pom" in your Jenkins (with a link and so on, thus exactly in a same environment in which you execute Sonar) and provide output of it to us?

Evgeny Mandrikov added a comment - 11/Oct/11 4:38 PM Also I would recommend to execute "mvn sonar:sonar" separately from any other goals like "package" and "javadoc:javadoc", thus split this onto two "mvn" commands.

David Mata Górriz added a comment - 13/Oct/11 1:29 PM I attach sonar /cis/maven/maven/bin/mvn help:effective-pom > effective-pom.txt /cis/maven/maven/bin/mvn -e -f /jrepos/develplugin/workspace/pom.xml sonar:sonar > sonar:sonar.without_ln.txt /cis/maven/maven/bin/mvn -e -f /cis/jenkins/jobs/develplugin/workspace/pom.xml sonar:sonar > sonar:sonar.ln.txt

Freddy Mallet added a comment - 19/Oct/11 4:07 PM Sorry David, but we really don't understand your use case. Feel free to provide more details but on the Sonar User mailing list.

Evgeny Mandrikov added a comment - 19/Oct/11 4:27 PM Hi David, Probably this problem comes from Tycho - see following discussion http://markmail.org/message/4iobrlewd4k4vgxs And I suggest you to switch to users mailing list for future discussions.

Mickael Istria added a comment - 11/Jan/13 8:30 AM I have the same error for JBoss Tools on (internal) JBoss Jenkins instance, using Sonar Jenkins plugin which use sonar-maven-plugin 2.0. The command-line started is: [jbosstools-4.1_trunk.component--webservices] $ /qa/tools/opt/maven-3.0.3/bin/mvn -f /home/test_hudson/hudson_workspace/workspace/jbosstools-4.1_trunk.component--webservices/pom.xml -e -B sonar:sonar -Dmaven.repo.local=/home/test_hudson/hudson_workspace/workspace/jbosstools-4.1_trunk.component--webservices/.repository -Dsonar.jdbc.driver=org.postgresql.Driver -Dsonar.jdbc.url=jdbc:postgresql: //sonar.mw.lab.eng.bos.redhat.com/sonar ******** ******** -Dsonar.host.url=http://sonar.mw.lab.eng.bos.redhat.com/sonar/ ******** ******** Log says [INFO] --- sonar-maven-plugin:2.0:sonar ( default -cli) @ ws --- [INFO] Sonar version: 3.4 [INFO] [09:05:55.326] Load project settings [INFO] [09:05:55.628] Install plugins [INFO] [09:06:00.634] Apply project exclusions [INFO] [09:06:00.635] Install JDBC driver [INFO] [09:06:00.671] Create JDBC datasource for jdbc:postgresql: //sonar.mw.lab.eng.bos.redhat.com/sonar [INFO] [09:06:00.875] Initializing Hibernate [INFO] [09:06:10.777] ------------- Analyzing org.jboss.tools.ws.core [INFO] [09:06:10.785] Load module settings [INFO] [09:06:11.492] Quality profile : [name=Sonar way,language=java] [INFO] [09:06:11.554] Configure maven plugins... [INFO] [09:06:11.706] Compare to previous analysis [INFO] [09:06:11.781] Compare over 5 days (2013-01-06) [INFO] [09:06:11.832] Compare over 30 days (2012-12-12) [INFO] [09:06:12.332] Initializer FindbugsMavenInitializer... [INFO] [09:06:12.349] Initializer FindbugsMavenInitializer done: 17 ms [INFO] [09:06:12.350] Initializer ProjectFileSystemLogger... [INFO] [09:06:12.351] Excluded tests: [**/ package -info.java] [INFO] [09:06:12.353] Source directories: [INFO] [09:06:12.354] /home/test_hudson/hudson_workspace/workspace/jbosstools-4.1_trunk.component--webservices/plugins/org.jboss.tools.ws.core/src [INFO] [09:06:12.354] /qa/services/test_hudson/hudson_workspace/workspace/jbosstools-4.1_trunk.component--webservices/plugins/org.jboss.tools.ws.core/src .... and the error is [ERROR] Failed to execute goal org.codehaus.mojo:sonar-maven-plugin:2.0:sonar ( default -cli) on project ws: Can not execute Sonar: Unable to read and import the source file : '/qa/services/test_hudson/hudson_workspace/workspace/jbosstools-4.1_trunk.component--webservices/plugins/org.jboss.tools.ws.core/src/org/jboss/tools/ws/core/JBossWSCorePlugin.java' with the charset : 'UTF-8'. Duplicate source for resource: org.jboss.tools.ws.core.JBossWSCorePlugin -> [Help 1] /home/test_hudson/hudson_workspace/workspace/ is the path of Jenkins $WORKSPACE and /home/test_hudson is a symlink to /qa/services/test_hudson/.

Mickael Istria added a comment - 11/Jan/13 11:46 AM This is a Tycho issue, reported in https://bugs.eclipse.org/bugs/show_bug.cgi?id=397996